The H-phosphonate approach to the solution phase synthesis of linear and cyclic oligoribonucleotides
Oxford University Press, 1999
academicJournal
Zugriff:
The solution phase synthesis of the tetraribonucleoside triphosphate r(ApCpGpU) 18 and the corresponding cyclic tetraribonucleotide 19 is described. The synthetic methodology is based on 5′- O -(DMTr)-2′- O -(Fpmp)-ribonucleoside-3′- H -phosphonate building blocks 10. Coupling, which is rapid and quantitative, is effected with di-(2-chlorophenyl) phosphorochloridate 5 at −40°C; it is followed by in situ treatment with 2-(4-methylphenyl) sulphanyl-1 H -isoindole-1,3(2 H )-dione 6b. The resulting sulphur transfer reaction also proceeds rapidly and quantitatively at −40°C. The same coupling and sulphur transfer steps are used in the cyclization reaction, but a 5′- H -phosphonate intermediate 24 is involved. The final three-step unblocking process involves treatment with (i) E-2-nitrobenzaldoxime 7 and N 1, N 1, N 3, N 3-tetramethylguanidine (TMG) 8 in acetonitrile, (ii) concentrated aqueous ammonia at 50°C and (iii) 0.5 mol/dm3 sodium acetate buffer (pH 4.0) at 40°C. The fully unblocked products 18 and 19 were characterized by NMR spectroscopy and by enzymatic digestion.
Titel: |
The H-phosphonate approach to the solution phase synthesis of linear and cyclic oligoribonucleotides
|
---|---|
Autor/in / Beteiligte Person: | Reese, Colin B. ; Song, Quanlai |
Link: | |
Veröffentlichung: | Oxford University Press, 1999 |
Medientyp: | academicJournal |
DOI: | 10.1093/nar/27.4.963 |
Schlagwort: |
|
Sonstiges: |
|