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A novel actinomycete strain, designated as MG28 T , was isolated from rhizosphere soil of Akebia trifoliate. The taxonomic position of the strain was investigated by using a polyphasic approach. BLAST search of the full-length 16S rRNA gene sequence of strain MG28 T indicated it represented a member of the genus Streptomyces, and displayed 99.03%, 98.90%, 98.90%, 98.89%, 98.83% and less than 98.70% sequence similarities with S. phaeolivaceus GY16 T , S. deccanensis KCTC 19241 T , S. europaeiscabiei KACC 20186 T , S. fructofermentans CGMCC 4.1593 T , S. scabiei NRRL B-16523 T and other species of the genus Streptomyces with validly published names, respectively. Phylogenomic analysis indicated that strain MG28 T was closely related to Streptomyces deccanensis KCTC 19241 T . However, the average nucleotide identity values and the digital DNA-DNA hybridization values between them indicated that strain MG28 T represented a distinct species. Furthermore, strain MG28 T was also distinctly differentiated from strain KCTC 19241 T by morphological, physiological and biochemical characteristics. Therefore, strain MG28 T (= MCCC 1K06895 T = JCM 34922 T ) represents a novel species of the genus Streptomyces, for which the name Streptomyces akebiae sp. nov. is proposed.

Titel:	Streptomyces akebiae sp. nov., a novel actinomycete isolated from rhizosphere soil of Akebia trifoliate.
Autor/in / Beteiligte Person:	Mo, P ; Li, K ; Zhou, J ; Zhou, F ; Chen, Y ; Lin, X ; Liu, X ; Huang, K ; Zou, W ; Gao, J
Link:	Zum Volltext
Zeitschrift:	Antonie van Leeuwenhoek, Jg. 115 (2022-10-01), Heft 10, S. 1297-1305
Veröffentlichung:	2004- : Berlin : Springer ; <i>Original Publication</i>: Wageningen, Netherland [etc.] Veenman [etc.], 2022
Medientyp:	academicJournal
ISSN:	1572-9699 (electronic)
DOI:	10.1007/s10482-022-01772-2
Schlagwort:	Bacterial Typing Techniques Base Composition DNA, Bacterial genetics Fatty Acids Nucleotides Phylogeny RNA, Ribosomal, 16S genetics Ranunculales Rhizosphere Sequence Analysis, DNA Soil Soil Microbiology Actinobacteria Streptomyces
Sonstiges:	Nachgewiesen in: MEDLINE Sprachen: English Publication Type: Journal Article Language: English [Antonie Van Leeuwenhoek] 2022 Oct; Vol. 115 (10), pp. 1297-1305. <i>Date of Electronic Publication: </i>2022 Aug 25. MeSH Terms: Actinobacteria* ; Streptomyces* ; Bacterial Typing Techniques ; Base Composition ; DNA, Bacterial / genetics ; Fatty Acids ; Nucleotides ; Phylogeny ; RNA, Ribosomal, 16S / genetics ; Ranunculales ; Rhizosphere ; Sequence Analysis, DNA ; Soil ; Soil Microbiology References: Alves R (2012) Relationship between fauna and people and the role of ethnozoology in animal conservation. Ethnobiol Conserv 1:1–69. https://doi.org/10.15451/ec2012-8-1.2-1-69. (PMID: 10.15451/ec2012-8-1.2-1-69) ; Atlas RM (1993) Handbook of microbiological media. Edited by Parks LC. CRC Press, Boca Raton. ; Bouizgarne B, Lanoot B, Loqman S, Sproer C, Klenk HP, Swings J, Ouhdouch Y (2009) Streptomyces marokkonensis sp. nov., isolated from rhizosphere soil of Argania spinosa L. 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Int J Syst Evol Microbiol 68:492–497. https://doi.org/10.1099/ijsem.0.002493. (PMID: 10.1099/ijsem.0.00249329143728) Grant Information: 21C0515 Education Department of Hunan Province; 21BSQD09 and 21BSQD10 the Doctoral Start-up project of Hunan University of Arts and Science; 2021JJ50024 Natural Science Foundation of Hunan Province; 19A340 Key projects of Hunan Provincial Department of Education Contributed Indexing: Keywords: Akebia trifoliate; Novel species; Polyphasic taxonomy; Streptomyces akebiae sp. nov.; Streptomycetaceae Substance Nomenclature: 0 (DNA, Bacterial) ; 0 (Fatty Acids) ; 0 (Nucleotides) ; 0 (RNA, Ribosomal, 16S) ; 0 (Soil) SCR Organism: Lardizabalaceae Entry Date(s): Date Created: 20220825 Date Completed: 20221007 Latest Revision: 20221011 Update Code: 20231215

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Streptomyces akebiae sp. nov., a novel actinomycete isolated from rhizosphere soil of Akebia trifoliate.